{"id":2530,"date":"2020-07-17T01:51:45","date_gmt":"2020-07-16T16:51:45","guid":{"rendered":"https:\/\/wp.study3.biz\/?p=2530"},"modified":"2020-07-17T01:53:17","modified_gmt":"2020-07-16T16:53:17","slug":"gpu%e6%af%8e%e3%81%aeamd-epyc-7702p-64-core-processor%e3%81%a7%e3%81%aengc-namd-2-12-1710251066628-atoms-days-ns%e3%82%92%e3%83%99%e3%83%b3%e3%83%81%e3%83%9e%e3%83%bc%e3%82%af%e3%81%97%e3%81%a6","status":"publish","type":"post","link":"https:\/\/wp.study3.biz\/?p=2530","title":{"rendered":"GPU\u6bce\u306eAMD EPYC 7702P 64-Core Processor\u3067\u306eNGC NAMD 2.12-171025(1,066,628 atoms )days\/ns\u3092\u30d9\u30f3\u30c1\u30de\u30fc\u30af\u3057\u3066\u307f\u305f"},"content":{"rendered":"<p>\u2190days\/ns, Less Is Better<br \/>\n<img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/wp.study3.biz\/wp-content\/uploads\/2020\/05\/EPYC7702P-NAMD.jpg\" alt=\"\" width=\"1098\" height=\"599\" class=\"alignnone size-full wp-image-2539\" \/><br \/>\n[chibi@centos8 ~]$ cat \/etc\/redhat-release<br \/>\nCentOS Linux release 8.1.1911 (Core)<br \/>\n[chibi@centos8 ~]$ nvcc -V<br \/>\nnvcc: NVIDIA (R) Cuda compiler driver<br \/>\nCopyright (c) 2005-2019 NVIDIA Corporation<br \/>\nBuilt on Wed_Oct_23_19:24:38_PDT_2019<br \/>\nCuda compilation tools, release 10.2, V10.2.89<\/p>\n<p>TIMING: 780  CPU: 17.1441, 0.071496\/step  Wall: 17.4025, 0.0711422\/step, 0.000395234 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 781  CPU: 17.1604, 0.016341\/step  Wall: 17.4192, 0.016681\/step, 8.80384e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 782  CPU: 17.1767, 0.016336\/step  Wall: 17.4355, 0.016355\/step, 8.17752e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 783  CPU: 17.1906, 0.013849\/step  Wall: 17.4497, 0.0141699\/step, 6.69136e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 784  CPU: 17.2203, 0.02974\/step  Wall: 17.4797, 0.029983\/step, 0.000133258 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 785  CPU: 17.2352, 0.014833\/step  Wall: 17.4949, 0.0152419\/step, 6.35078e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 786  CPU: 17.2519, 0.016735\/step  Wall: 17.5118, 0.0168772\/step, 6.56335e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 787  CPU: 17.2677, 0.015805\/step  Wall: 17.5275, 0.0157108\/step, 5.67336e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 788  CPU: 17.2964, 0.028697\/step  Wall: 17.5569, 0.0294321\/step, 9.81069e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 789  CPU: 17.3122, 0.01582\/step  Wall: 17.5726, 0.0156629\/step, 4.78589e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 790  CPU: 17.328, 0.015759\/step  Wall: 17.5889, 0.0163081\/step, 4.53002e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 791  CPU: 17.3427, 0.014769\/step  Wall: 17.6045, 0.0155461\/step, 3.88652e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 792  CPU: 17.3744, 0.031706\/step  Wall: 17.6355, 0.031049\/step, 6.89978e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 793  CPU: 17.3893, 0.014835\/step  Wall: 17.6507, 0.0151949\/step, 2.95456e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 794  CPU: 17.4051, 0.015788\/step  Wall: 17.6673, 0.0166111\/step, 2.76852e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 795  CPU: 17.4209, 0.015821\/step  Wall: 17.6831, 0.0157809\/step, 2.1918e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 796  CPU: 17.4506, 0.029758\/step  Wall: 17.7126, 0.0294611\/step, 3.27346e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 797  CPU: 17.4655, 0.01484\/step  Wall: 17.7279, 0.0153258\/step, 1.27715e-05 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 798  CPU: 17.4813, 0.015779\/step  Wall: 17.7444, 0.016479\/step, 9.15501e-06 hours remaining, 2874.429688 MB of memory in use.<br \/>\nTIMING: 799  CPU: 17.4961, 0.014825\/step  Wall: 17.7585, 0.014102\/step, 3.91722e-06 hours remaining, 2874.429688 MB of memory in use.<br \/>\nInfo: Benchmark time: 40 CPUs 0.0214304 s\/step <strong>0.248037 days\/ns<\/strong> 2876.5 MB memory<br \/>\nTIMING: 800  CPU: 17.5673, 0.071188\/step  Wall: 17.8304, 0.0719192\/step, 0 hours remaining, 2876.503906 MB of memory in use.<br \/>\nENERGY:     800     38120.3738    105703.9937     81582.9837      5034.7656       -4004835.6487    288322.1569         0.0000         0.0000    648481.8512       -2837589.5238       293.6653  -3486071.3750  -2836150.3451       293.8443         -19015.2041        58.9828  10339165.6877         5.6404         5.3503<\/p>\n<p>\u30c7\u30fc\u30bf\u8a73\u7d30<br \/>\n<a href=\"https:\/\/wp.study3.biz\/wp-content\/uploads\/2020\/05\/AMD-EPYC-7702P-64-Core-Processor-CentOS-Linux-release-8.1.1911-TITAN-RTX-x2-RTX2080Ti-x2-CUDA-10.2-namd-2.12-171025-STMV-virus-benchmark-1066628-atoms-periodic-PME-0.248037-days-ns.txt\">AMD EPYC 7702P 64-Core Processor CentOS Linux release 8.1.1911 TITAN RTX x2 RTX2080Ti x2 CUDA 10.2 namd 2.12-171025 STMV (virus) benchmark (1,066,628 atoms, periodic, PME) 0.248037 days ns<\/a><br \/>\n<a href=\"https:\/\/wp.study3.biz\/wp-content\/uploads\/2020\/05\/AMD-EPYC-7702P-64-Core-Processor-CentOS-Linux-release-8.1.1911-TITAN-RTX-x2-RTX2080Ti-x2-CUDA-10.2-namd-2.12-171025-STMV-virus-benchmark-1066628-atoms-periodic-PME-0.248037-days-ns-nvidia-smi.txt\">AMD EPYC 7702P 64-Core Processor CentOS Linux release 8.1.1911 TITAN RTX x2 RTX2080Ti x2 CUDA 10.2 namd 2.12-171025 STMV (virus) benchmark (1,066,628 atoms, periodic, PME) 0.248037 days ns nvidia-smi<\/a><br \/>\n\u53c2\u8003\u30b5\u30a4\u30c8 <a href=\"https:\/\/www.hpc-technologies.co.jp\/namd-benchmark\">1<\/a> <a href=\"https:\/\/www.pugetsystems.com\/labs\/hpc\/AMD-Threadripper-3990x-64-core-Linpack-and-NAMD-Performance-Linux-1666\/\">2<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>\u2190days\/ns, Less Is Better [chibi@centos8 ~]$ cat \/etc\/redhat-release CentOS Linux release 8.1.1911 (Core) [chib &hellip; <a href=\"https:\/\/wp.study3.biz\/?p=2530\">\u7d9a\u304d\u3092\u8aad\u3080 <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[5,18],"tags":[],"class_list":["post-2530","post","type-post","status-publish","format-standard","hentry","category-centos8","category-nvidia"],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/wp.study3.biz\/index.php?rest_route=\/wp\/v2\/posts\/2530","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/wp.study3.biz\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/wp.study3.biz\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/wp.study3.biz\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/wp.study3.biz\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=2530"}],"version-history":[{"count":6,"href":"https:\/\/wp.study3.biz\/index.php?rest_route=\/wp\/v2\/posts\/2530\/revisions"}],"predecessor-version":[{"id":2546,"href":"https:\/\/wp.study3.biz\/index.php?rest_route=\/wp\/v2\/posts\/2530\/revisions\/2546"}],"wp:attachment":[{"href":"https:\/\/wp.study3.biz\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=2530"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/wp.study3.biz\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=2530"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/wp.study3.biz\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=2530"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}